About CLC Genomics Workbench
Using super-fast, integrated, high-performance computing algorithms, CLC Genomics Workbench sets a new standard for desktop based reference assembly and de novo assembly of SOLiD, Solexa, 454, and Helicos sequencing data# De novo assembly of Sanger, 454, Solexa, Helicos, and SOLiD data.
- Reference assembly of Sanger, 454, Solexa, Helicos, and SOLiD sequencing data.
- Assembly of genomes of any size (only limited by RAM available).
- Assembly of standard read data and support for assembly of paired end reads / mate pair reads of any sequencing technology.
- Advanced graphical tools for the detection of large scale mutations/rearrangements like inversions, translocations, duplications, and deletions.
- Support for multiplex sequencing using 454, Solexa, or SOLiD technology.
- Integration with CLC bio’s High Performance Computing solutions, making assemblies very fast.
- Interactive and zoom-able viewing of genome assemblies, including sequencing reads, quality data, and reference sequences. Full integration of the viewers with the downstream analyses.
- Filtering and trimming of reads.
- Advanced SNP detection and variant reporting.
- Support for integration with CLC Bioinformatics Database.

What’s New in this Version
- Support for paired-end Sanger reads
- Support for paired-end FASTA reads
- Improved user interface of High-throughput Sequencing Data import dialog
- Assembly report includes information about assembly parameters
- Corrected error when opening multiple consensus sequences
- Fixed problem with import of NGS data in FASTA format
- Improved error handling for assembly
- Fixed issue with contig selections while scrolling
- Corrected error introduced by overlapping mate-pairs