http://www.apple.com/downloads/macosx/math_science/ Mac OS X downloads provided by Apple. en-us Copyright 2008, Apple Inc. downloads@apple.com Wed, 19 Nov 2008 12:04:06 PST Wed, 19 Nov 2008 12:04:06 PST Mac OS X - Math & Science In house http://blogs.law.harvard.edu/tech/rss/ http://www.apple.com/downloads/macosx/math_science/simpledemviewer_yoshiakikatayanagi.html Browses DEM data as elevation color maps. Creates bird-eye views, Mercator and other projection maps, profiles, and more. About SimpleDEMViewer
Browses DEM (Digital Elevation Model) data as pictures. It displays color elevation map with shading. It supports gtopo30, etopo2, etopo5, globe, srtm, srtm dted, hydro1k and many bil form data. User should prepare those data separately. You can make bird-eye views, stereographs, profiles, Mercator projection maps, corn projection maps, orthographic projection maps and azimuthal equidistant projection maps.

You can create memos, routes and areas on maps. You can show pictures, movies or web pages linked to any places on the earth using memo function. ]]> Wed, 19 Nov 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/statplusmac2008.html Statistical analysis on a Mac made easy with StatPlus:mac and Microsoft Excel. Perform statistical analysis on a Mac in the familiar environment. About StatPlus:mac 2008
Perform statistical analysis on a Mac in the familiar environment. Turn Microsoft Excel 2004 or 2008 into a powerful statistical package with StatPlus:mac.

Microsoft Excel provides invaluable calculation tools to Mac users. Its powerful features combined with ease of use made Microsoft Excel a spreadsheet of choice for many Macintosh users. But what if you need more than the limited set of data analysis tools available in Microsoft Excel? There aren’t many tools that are as affordable and as easy to learn and use as Microsoft Excel for Mac!

StatPlus:mac offers you an ability to perform heavy-duty data analysis on your Mac in a familiar and convenient Excel environment. Integrating tightly with Microsoft Excel, StatPlus:mac empowers Microsoft Excel with a set of heavy-duty statistical analysis and data management tools, turning Microsoft Excel for Mac into a full-featured statistical analysis suite. Many more features.]]> Tue, 18 Nov 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/moonmenu.html Contained therein is a beautiful and simple interactive panel to investigate lunar data for any date. About MoonMenu
MoonMenu draws the current phase of the moon in the menubar. The menu, when selected, reveals the following information: A textual description of the moon phase, Illumination percentage, The moon’s age in days, Current lunation number, Farmers’ Almanac names for the current lunation, Upcoming quarter predictions, Automatic “blue moon” detection that actually colors the moon blue, Sun rise/set times, Twilight rise/set times, Moon rise/set times. ]]> Fri, 14 Nov 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/calculus.html Currency-converting capabilities etc. About Calculus
Useful calculator that besides the usual converting functions (Temperature, Pressure, Speed etc.) handles currency-convertion. If used only to get x-rates from the Net, it is a freeware application.

- Double display in conversion mode: it shows both the entity converting from (i.e. currency, degrees etc) and the entity converting to.
- Updating x-rates from the Net.
- Base-rates management for particular currencies.
- Auto Decimals-Management for particular currencies.
- Delta variation in currency calculation.
- Saving and printing functions.]]> Thu, 13 Nov 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/clcgenomicsworkbench.html CLC Genomics Workbench is the most user-friendly and powerful Next Generation Sequencing application in the market. About CLC Genomics Workbench
Using super-fast, integrated, high-performance computing algorithms, CLC Genomics Workbench sets a new standard for desktop based reference assembly and de novo assembly of SOLiD, Solexa, 454, and Helicos sequencing data# De novo assembly of Sanger, 454, Solexa, Helicos, and SOLiD data.
- Reference assembly of Sanger, 454, Solexa, Helicos, and SOLiD sequencing data.
- Assembly of genomes of any size (only limited by RAM available).
- Assembly of standard read data and support for assembly of paired end reads / mate pair reads of any sequencing technology.
- Advanced graphical tools for the detection of large scale mutations/rearrangements like inversions, translocations, duplications, and deletions.
- Support for multiplex sequencing using 454, Solexa, or SOLiD technology.
- Integration with CLC bio’s High Performance Computing solutions, making assemblies very fast.
- Interactive and zoom-able viewing of genome assemblies, including sequencing reads, quality data, and reference sequences. Full integration of the viewers with the downstream analyses.
- Filtering and trimming of reads.
- Advanced SNP detection and variant reporting.
- Support for integration with CLC Bioinformatics Database.]]> Wed, 12 Nov 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/sspx.html Inverse strain modeling About SSPX
A program to calculate strain/strain rate from displacement/velocity data in two and three dimensions. SSPX is a full fledged inverse modeling program to calculate best fitting deformation tensors given displacement or velocity vectors at a minimum of three points in two dimensions, or four points in three dimensions.

SSPX works equally well on small deformation problems (i.e. infinitesimal strain), and large deformation problems (i.e. finite strain). SSPX is free for academics.]]> Tue, 11 Nov 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/molegromolecularviewer.html A free cross-platform application for visualization of molecules and Molegro Virtual Docker results. About Molegro Molecular Viewer
A free cross-platform application for visualization of molecules and Molegro Virtual Docker results. Molegro Molecular Viewer offers a high-quality visualization tool combined with a user interface experience focusing on usability and productivity.

Highlights of Molegro Molecular Viewer:
- Share and view results from Molegro Virtual Docker docking runs
- Imports and exports PDB, SDF, Mol2, and MVDML files
- Automatic preparation of molecules
- Molecular surface and backbone visualization
- Labels, sequence viewer, and biomolecule generator
- Cropping of molecules and clipping planes
- Structural protein alignment
- Cross-platform: Windows, Linux, and Mac OS X is supported]]> Tue, 11 Nov 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/astrograv.html A program for studying how objects move and interact under the force of gravity. About AstroGrav
A program that allows you to study how astronomical objects move and interact under the force of gravity. It features superb interactive 3D graphics which allow you to move around within an astronomical system that you are viewing, while watching how it evolves with the passage of time.

A wide variety of sample files are provided, including Solar System, space mission and abstract systems, and these enable you to experiment with AstroGrav without having to go to the trouble of entering your own data. The comprehensive editing facilities allow you to either create your own astronomical systems or to modify existing ones, and provide you with an almost endless scope for experimentation and investigation.]]> Tue, 04 Nov 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/lynkeoseclipsechaserpluginspack.html This distribution contains Lynkeos plugins specialized to process images of a total solar eclipse. About Lynkeos Eclipse chaser plugins pack
As the name suggests, this distribution contains plugins intended to process images of a total solar eclipse.
- Manual align” allows to manually align the images, as the automatic alignment algorithms do not work correctly on the solar corona.
- Stack (total solar eclipse)” stacks images with a wide range of exposure ; it also cancels artefacts caused by the ransition between the lunar edge and the inner corona.
- Radial unsharp” process the corona with a radial unsharp mask, which enhances the spikes and streamers of the corona. ]]> Mon, 03 Nov 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/saoimageds9.html An astronomical imaging and data visualization application. About SAOImage DS9
An astronomical imaging and data visualization application. DS9 supports FITS images and binary tables, multiple frame buffers, region manipulation, and many scale algorithms and colormaps. It provides for easy communication with external analysis tasks and is highly configurable and extensible. ]]> Thu, 30 Oct 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/macvector.html A general DNA and Protein sequence analysis, manipulation and documentation program for molecular biologists. About MacVector
A comprehensive Macintosh application that provides sequence editing, primer design, internet database searching, protein analysis, sequence confirmation, multiple sequence alignment, phylogenetic reconstruction, coding region analysis, and a wide variety of other functions. MacVector is widely regarded as the most intuitive, easy to use program available for sequence analysis.]]> Tue, 28 Oct 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/xhromatogram.html A viewer for chromatography and mass spectrometry data in the AIA standard formats. About Xhromatogram
A viewer for chromatography and mass spectrometry data in the AIA standard formats. AIA is the industry standard for chromatography data interchange, and in turn is based on the netCDF data format and libraries.

Until now, if you wanted to work with a chromatogram on a Mac, you needed to export the image as PDF and the results as a spreadsheet. If you were not so lucky, it would be inside a presentation, or worse yet a word processing document. Now you can work with the real data.

Xhromatogram can read AIA chromatography files, display the chromatograms, and show peak integration results. It can read AIA mass spectrometry files, display the spectra, generate a mass chromatogram, or show a table of library data. It can show file metadata and print reports. It exports several vector and bitmap graphical formats, and supports copy/paste of both images and text.

Xhromatogram is free, open-source software released under a generous Apache-style license (version 1.1). ]]> Mon, 27 Oct 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/molegrovirtualdocker.html An integrated software platform for drug discovery using molecular docking. About Molegro Virtual Docker
Handles all aspects of the molecular docking process from preparation of the molecules to determination of the potential binding sites of the target protein, and prediction of the binding modes of the ligands. Molegro Virtual Docker offers high-quality docking based on a novel optimization technique combined with a user interface experience focusing on usability and productivity.

Highlights of Molegro Virtual Docker:
- Automated preparation of molecular structures
- Active site prediction
- Similarity Docking for flexible ligand alignment and focused template docking
- Data Analyzer for creating regression models (using neural networks or MLR), visualizing data, and performing feature selection
- Docking with sidechain flexibility (taking induced fit interactions into account)
- Sidechain Minimization Tool for optimizing receptor conformations before docking
- Many more features]]> Fri, 24 Oct 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/atomicmac.html Full featured periodic table of the elements with detailed physical and nuclear information. About Atomic Mac
The award-winning periodic table of the elements for the Macintosh. In addition to the usual information found in such programs, The Atomic Mac also contains a wealth of nuclear information on each isotope, including half life, decay mode, and daughter products. No other periodic table of the elements has more data than The Atomic Mac!

X-ray data (fluorescence and binding energies) is included, as well as photon interaction (mean free path) values. Electron shell information and alpha particle energies are also listed. In addition you can view the visible spectra, and get a table of wavelengths and relative amplitudes. Just click on one of the elements.

Data is displayed for the following physical properties:
- Density
- Heat of Vaporization
- Heat of Fusion
- Specific Heat
- Thermal Conductivity
- Linear Expansion Coefficient
- Melting Point
- Boiling Point
- Atomic Radius
- Covalent Radius
- Many more]]> Thu, 23 Oct 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/kspectratoolkit.html Advanced time series analysis: spectral estimation, decomposition into trends, oscillatory components and noise; reconstruction and prediction. About kSpectra Toolkit
It is a set of advanced tools for spectral estimation of a time series, decomposing it into trends, oscillatory components and noise with sophisticated statistical tests, data compression, as well as reconstruction and prediction. KSpectra Toolkit takes full advantage of latest Max OS X technologies to provide the best user experience and performance. It includes examples in finance, economics, geophysics, and health sciences.]]> Thu, 23 Oct 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/equinox6.html A powerful astronomy program has many features for both the beginner and advanced astronomer. About Equinox 6
A powerful planetarium program that has many features for both the beginner and advanced astronomer. It has filters for organizing deep sky objects with many controls to adjust the sky display, colors and fonts. There is a window that simulates a telescope’s view. Equinox 6 can control most telescopes, focusers, Canon cameras and webcams. You can build tours and photo horizons and modify the database. You can even slew your telescope or change the display with voice commands. ]]> Mon, 20 Oct 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/crystalmaker.html Crystal and molecular structures visualization software. Elegant, easy-to-use photo-realistic graphics and power tools. About CrystalMaker
An award-winning Mac program for building, displaying and manipulating all kinds of crystal and molecular structures - with real-time photo-realistic graphics and “out-of-the-screen” 3D display.

CrystalMaker allows visualization of massive structures, with fast bond and polyhedra generation and the display of thermal ellipsoids. The program supports a wide range of data formats, exports high-resolution graphics, QuickTime movies and VR objects - and works with our “SingleCrystal” and “CrystalDiffract” diffraction software.

CrystalMaker 8 leverages key functionality in Tiger and Leopard, with support for Cover Flow, Quick Look, Spotlight and full-screen working.]]> Fri, 17 Oct 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/mconvert.html Prime converter of measures: currencies, metric, imperial and others. About MConvert
The prime conversion software available for currency, metric and imperial, currently including the following 26 conversion groups and many subgroups:

Acceleration, Angle, Area, Base, Consumption, Currency, Data, Density, Energy, Energy/Mass, Force, GPS, Illuminance, Length, Luminance, Mass, Permeability, Power, Pressure, Radioactivity, Temperature, Time, Torque, Velocity, Viscosity, Volume.

- Anytime currency updates online at IMF server for free.
- Support of multi conversion.
- Export results.
- Ergonomic and most user-friendly.
- Educational display of all units in one window.
- Flexible display of units.
- e=mc2 conversions.

MConvert is using the following references:

- BIPM (BUREAU INTERNATIONAL DES POIDS ET MESURES)
- IERS (INTERNATIONAL EARTH ROTATION AND REFERENCE SYSTEMS SERVICE)
- NIST (NATIONAL INSTITUTE OF STANDARDS AND TECHNOLOGY)

This is the most comprehensive and accurate converter available and a great tool for education and reference.]]> Thu, 16 Oct 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/geneious.html Aligns sequences, visualizes 3D structures, builds trees. With many other core bioinformatics functions. About Geneious
An automatically-updating library of genomic and genetic data; that provides a fully integrated, visually-advanced toolset for

- Sequence alignment and phylogenetics
- Sequence analysis, Contig assembly,
- primers, restriction analysis
- BLAST. Protein structure viewing, NCBI, UniProt, Pubmed auto-find and more
- API for creating you own plug-ins ]]> Mon, 13 Oct 2008 00:00:00 PST http://www.apple.com/downloads/macosx/math_science/mjograph.html A simple but highly-functional 2D(X-Y) graph editor. About Mjograph
A simple but highly-functional 2D plotting program. It is well-customized for researchers, especially in the field of science, whose research works include computer simulations and visualization of their numerical results, and it does free you from every single troublesome operation. What’s more, this program comes with powerful features helping you to create publication-quality graphs.

Major features:
- simple user interface
- just drag and drop data file(s) you want to plot
- interactive zoom and scroll with the use of mouse action
- export as EPS, PNG, etc.
- simple tools to draw annotation objects (line, arrow, circle, and text)
- directly embed mathematical expressions using LaTeX
- various plotting methods (line, pulses, step, region, and spline)]]> Mon, 13 Oct 2008 00:00:00 PST